Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13007.1Type IV pilus transmembrane protein FimT. (161 aa)    
Predicted Functional Partners:
AKU13008.1
Type 4 fimbrial biogenesis relatedtransmembrane protein.
 
  
 0.965
AKU13009.1
Putative type 4 pilus biogenesis protein.
 
  
 0.964
AKU13006.1
Type IV pilus assembly protein PilE.
 
  
 0.960
AKU13011.1
Putative type 4 pilus biogenesis protein.
 
  
 0.935
AKU14213.1
Hypothetical protein.
 
  
 0.876
AKU13010.1
Hypothetical protein.
  
  
 0.796
AKU14058.1
Type IV fimbrial biogenesis protein.
  
  
 0.782
AKU14060.1
Type IV fimbrial biogenesis protein.
 
  
 0.766
AKU14059.1
Fimbrial type-IV assembly protein PilO.
 
  
 0.758
AKU13474.1
Hypothetical protein.
  
     0.720
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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