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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13011.1Putative type 4 pilus biogenesis protein. (1125 aa)    
Predicted Functional Partners:
AKU13009.1
Putative type 4 pilus biogenesis protein.
 
  
 0.970
AKU13008.1
Type 4 fimbrial biogenesis relatedtransmembrane protein.
 
  
 0.968
AKU13006.1
Type IV pilus assembly protein PilE.
 
  
 0.937
AKU13007.1
Type IV pilus transmembrane protein FimT.
 
  
 0.932
AKU14215.1
Hypothetical protein.
 
  
 0.917
AKU14216.1
Hypothetical protein.
 
  
 0.862
AKU14217.1
Hypothetical protein.
 
  
 0.814
AKU14214.1
Hypothetical protein.
  
  
 0.749
AKU13965.1
Hypothetical protein.
  
     0.720
AKU14218.1
Hypothetical protein.
 
  
 0.720
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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