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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13038.1Putative sulfonate transport system ATP-binding protein. (265 aa)    
Predicted Functional Partners:
AKU13037.1
Putative sulfonate transport system periplasmic component.
 
 
 0.997
AKU13039.1
Putative sulfonate transport system permease.
 
 
 0.977
AKU11991.1
Nitrate ABC transporter permease.
 
 
 0.924
AKU10641.1
Putative nitrate transport system permease.
 
 0.921
AKU10640.1
Assimilatory nitrate transport system, periplasmic-binding protein.
 
 0.888
AKU10988.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.791
AKU11990.1
Nitrate ABC transporter periplasmic nitrate-binding protein.
 
 
 0.706
AKU13040.1
Hypothetical protein.
       0.696
AKU10987.1
Putative sulfonate ABC transporter, periplasmic sulfonate-binding protein.
  
 
 0.649
AKU11999.1
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
  
 
 0.635
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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