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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13039.1Putative sulfonate transport system permease. (276 aa)    
Predicted Functional Partners:
AKU13038.1
Putative sulfonate transport system ATP-binding protein.
 
 
 0.977
AKU13037.1
Putative sulfonate transport system periplasmic component.
 
 
 0.976
AKU11992.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.926
AKU10642.1
Assimilatory nitrate transport system, ATP-binding protein.
 
 
 0.923
AKU10989.1
ABC transporter, sulfonate transport system ATP-binding protein.
 
 
 0.916
AKU10640.1
Assimilatory nitrate transport system, periplasmic-binding protein.
 
 
 0.877
AKU11990.1
Nitrate ABC transporter periplasmic nitrate-binding protein.
 
 
 0.801
AKU13040.1
Hypothetical protein.
       0.769
AKU10988.1
Binding-protein-dependent transport systems inner membrane component.
  
     0.669
AKU13811.1
ABC transporter, permease protein.
  
  
  0.664
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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