Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13040.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
AKU13039.1
Putative sulfonate transport system permease.
       0.769
AKU13037.1
Putative sulfonate transport system periplasmic component.
 
     0.732
AKU13169.1
Sulfur covalently-binding protein.
 
   
 0.719
AKU13038.1
Putative sulfonate transport system ATP-binding protein.
       0.694
AKU14300.1
Outer membrane protein.
 
     0.668
AKU13298.1
Hypothetical protein.
  
     0.643
AKU10931.1
Hypothetical protein.
 
     0.637
AKU11803.1
Hypothetical protein.
  
     0.634
AKU12601.1
Hypothetical protein.
  
     0.626
AKU13168.1
Phosphodiesterase I.
 
   
 0.623
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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