STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13082.1Transposase IS66. (509 aa)    
Predicted Functional Partners:
AKU13083.1
Transposase.
 
     0.904
AKU11349.1
Transposase.
 
     0.778
AKU12380.1
Transposase.
 
     0.778
AKU13140.1
Transposase.
 
     0.778
AKU14273.1
Transposase.
 
     0.778
AKU14296.1
IS66 Orf2 family protein.
 
     0.778
AKU13084.1
Transposase IS3/IS911 family protein.
  
  
 0.604
AKU13081.1
Hypothetical protein.
       0.537
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.