Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU13091.1Outer membrane lipoprotein. (190 aa)    
Predicted Functional Partners:
AKU11986.1
Hypothetical protein.
  
 0.799
AKU13458.1
Flagellar motor protein.
  
 0.773
AKU13056.1
Flagellar motor protein.
   
 0.665
AKU10424.1
TonB-dependent receptor.
  
  
 0.659
pal
Outer membrane protein, porin-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
     0.592
AKU11662.1
Outer membrane protein OmpW.
     
 0.582
AKU13133.1
Hypothetical protein.
  
 
 0.578
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.565
AKU11742.1
Polysaccharide export protein EpsE.
  
 0.550
AKU10227.1
Hypothetical protein.
   
 0.543
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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