STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13096.1Decaheme c-type cytochrome, DmsE family. (304 aa)    
Predicted Functional Partners:
AKU13095.1
Hypothetical protein.
 
     0.933
AKU13965.1
Hypothetical protein.
 
 
 0.836
AKU11803.1
Hypothetical protein.
 
 
 0.813
AKU11013.1
Hypothetical protein.
 
     0.720
AKU10174.1
Hypothetical protein.
  
     0.681
AKU10356.1
Cytochrome c family protein.
 
  
 0.677
AKU10212.1
Hypothetical protein.
 
 
 0.676
AKU12712.1
Hypothetical protein.
 
 
 0.675
AKU13964.1
Cytochrome c family protein.
 
  
 0.656
AKU10178.1
Hypothetical protein.
 
 
 0.641
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.