rpoD protein (Azoarcus sp. CIB) - STRING interaction network

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rpoD

RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (663 aa)

Predicted Functional Partners:

rpoB

0.985

rpoC

0.979

rpoA

0.966

dnaG

0.947

rpoZ

0.941

nusA

0.899

AKU12972.1

0.829

AKU10664.1

0.825

AKU11911.1

0.759

AKU12982.1

0.753

Your Current Organism:

Azoarcus sp. CIB

NCBI taxonomy Id: 198107
Other names: A. sp. CIB

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKU10664.1	rpoA	AzCIB_0759	AzCIB_4013	Stringent starvation protein A; Belongs to the GST superfamily.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.879
AKU10664.1	rpoB	AzCIB_0759	AzCIB_4046	Stringent starvation protein A; Belongs to the GST superfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.836
AKU10664.1	rpoC	AzCIB_0759	AzCIB_4045	Stringent starvation protein A; Belongs to the GST superfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.826
AKU10664.1	rpoD	AzCIB_0759	AzCIB_3229	Stringent starvation protein A; Belongs to the GST superfamily.	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.825
AKU10664.1	rpoZ	AzCIB_0759	AzCIB_0221	Stringent starvation protein A; Belongs to the GST superfamily.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.846
AKU11911.1	rpoD	AzCIB_2016	AzCIB_3229	O6-methylguanine-DNA methyltransferase/Ada regulatory protein.	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.759
AKU12972.1	rpoA	AzCIB_3079	AzCIB_4013	Cyclic AMP receptor protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.801
AKU12972.1	rpoB	AzCIB_3079	AzCIB_4046	Cyclic AMP receptor protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.806
AKU12972.1	rpoC	AzCIB_3079	AzCIB_4045	Cyclic AMP receptor protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.805
AKU12972.1	rpoD	AzCIB_3079	AzCIB_3229	Cyclic AMP receptor protein.	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.829
AKU12972.1	rpoZ	AzCIB_3079	AzCIB_0221	Cyclic AMP receptor protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.795
AKU12982.1	rpoA	AzCIB_3089	AzCIB_4013	Putative transcriptional regulator, MerR family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.591
AKU12982.1	rpoB	AzCIB_3089	AzCIB_4046	Putative transcriptional regulator, MerR family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.587
AKU12982.1	rpoC	AzCIB_3089	AzCIB_4045	Putative transcriptional regulator, MerR family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.567
AKU12982.1	rpoD	AzCIB_3089	AzCIB_3229	Putative transcriptional regulator, MerR family.	RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.753
AKU12982.1	rpoZ	AzCIB_3089	AzCIB_0221	Putative transcriptional regulator, MerR family.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.577
dnaG	nusA	AzCIB_3228	AzCIB_2623	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Transcription elongation factor; Participates in both transcription termination and antitermination.	0.518
dnaG	rpoA	AzCIB_3228	AzCIB_4013	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.661
dnaG	rpoB	AzCIB_3228	AzCIB_4046	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.633
dnaG	rpoC	AzCIB_3228	AzCIB_4045	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.494

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