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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13123.1ClpV1 protein; Belongs to the ClpA/ClpB family. (881 aa)    
Predicted Functional Partners:
AKU13128.1
Hypothetical protein.
 
 
 0.966
AKU13124.1
Hypothetical protein.
 
  
 0.952
AKU13126.1
Hypothetical protein.
 
  
 0.949
AKU13125.1
Hypothetical protein.
 
  
 0.945
AKU13127.1
Hypothetical protein.
 
  
 0.936
AKU13129.1
Hypothetical protein.
 
  
 0.932
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 0.918
AKU13134.1
Rhs element Vgr protein.
 
  
 0.914
AKU13133.1
Hypothetical protein.
 
  
 0.890
AKU10053.1
Rhs element Vgr protein.
 
  
 0.887
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.