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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13153.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (313 aa)    
Predicted Functional Partners:
AKU10935.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.577
AKU10263.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.556
AKU11026.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.526
AKU13155.1
Permease.
       0.521
AKU13154.1
2-haloalkanoic acid dehalogenase.
       0.520
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
       0.500
AKU11068.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.450
AKU10254.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.419
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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