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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13159.1Putative TonB-dependent receptor. (693 aa)    
Predicted Functional Partners:
AKU12541.1
Hypothetical protein.
 
     0.749
AKU13952.1
Hypothetical protein.
 
     0.747
AKU13801.1
Hypothetical protein.
     
 0.706
AKU13837.1
Hypothetical protein.
  
  
  0.658
AKU12041.1
Hypothetical protein.
     
 0.609
AKU11662.1
Outer membrane protein OmpW.
     
 0.597
AKU10227.1
Hypothetical protein.
  
 
 0.588
AKU12627.1
Porin.
  
 
 0.582
AKU12858.1
Hypothetical protein.
  
 
 0.579
AKU13823.1
Hypothetical protein.
  
 
 0.579
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.