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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13219.1Hypothetical protein. (618 aa)    
Predicted Functional Partners:
AKU12542.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.897
AKU11984.1
Diguanylate cyclase; Contains PAS/PAC and GAF sensors.
 
 0.894
AKU13803.1
Hypothetical protein.
 
 
 0.875
AKU12533.1
Sensor histidine kinase.
 
 
 0.869
AKU12240.1
Complex sensory protein.
 
 
0.864
AKU10216.1
Hypothetical protein.
 
 
 
 0.850
AKU10943.1
PAS/PAC sensor-containing diguanylate cyclase.
 
 
 0.849
AKU12597.1
Putative signaling protein.
 
 
0.847
AKU09920.1
Hypothetical protein.
 
 
 0.842
AKU10705.1
Diguanylate cyclase with PAS/PAC sensor.
 
 
 0.840
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.