Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13237.1General secretion pathway protein G. (127 aa)    
Predicted Functional Partners:
AKU13238.1
General secretion pathway gspG related transmembrane protein.
 
  
 
0.978
AKU13239.1
General secretion pathway protein D.
 
  
 0.932
AKU10070.1
Type II secretory pathway, pseudopilin PulG.
 
  
 
0.929
AKU13236.1
Hypothetical protein.
 
     0.925
AKU13240.1
Hypothetical protein.
 
     0.845
AKU13244.1
Type II secretion system protein E.
 
 
 0.830
AKU13245.1
Type II secretion system protein.
 
  
 0.799
AKU10083.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 
 0.797
AKU10089.1
Hypothetical protein.
 
     0.783
AKU10087.1
Hypothetical protein.
 
     0.760
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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