Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13252.1Hypothetical protein. (296 aa)    
Predicted Functional Partners:
AKU13362.1
Thiamine biosynthesis protein.
  
 0.934
AKU13251.1
Molybdopterin biosynthesis protein MoeY.
    
 0.905
AKU13253.1
Hypothetical protein.
 
     0.856
AKU10479.1
biotin--acetyl-CoA-carboxylase ligase.
  
  
 0.836
AKU13265.1
Hypothetical protein.
 
     0.791
AKU13577.1
Exosortase 1.
 
  
 0.766
AKU11750.1
Molybdenum cofactor biosynthesis protein E.
  
 0.765
AKU13267.1
Sensory transduction histidine kinase.
 
  
 0.764
AKU13581.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
  
 0.764
AKU13582.1
Hypothetical protein.
 
     0.762
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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