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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13255.1Putative response regulator protein. (393 aa)    
Predicted Functional Partners:
AKU10031.1
PAS domain S-box.
 
 
 0.933
AKU11477.1
Sensory transduction histidine kinase.
 
 
 0.925
AKU11211.1
Hypothetical protein.
 
 
 0.917
AKU10597.1
Putative hybrid sensor and regulator.
 
 
 0.903
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
 
 
0.902
AKU10274.1
PAS/PAC sensor signal transduction histidine kinase.
  
 
 0.820
AKU13257.1
Hypothetical protein.
 
     0.800
AKU10229.1
Hpt sensor hybrid histidine kinase.
 
 
 0.760
AKU10001.1
Hypothetical protein.
  
     0.750
AKU13256.1
Zinc-binding alcohol dehydrogenase.
       0.737
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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