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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13257.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
AKU13255.1
Putative response regulator protein.
 
     0.800
AKU13437.1
Hypothetical protein.
 
    0.763
AKU10001.1
Hypothetical protein.
  
     0.756
AKU14128.1
Hypothetical protein.
  
     0.749
AKU13778.1
Twitching motility protein.
 
     0.734
AKU13949.1
Putative methyltransferase.
  
     0.720
AKU13216.1
Hypothetical protein.
  
     0.701
ycgR
Hypothetical protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.
  
    0.676
AKU14081.1
Peptidoglycan-binding protein.
  
     0.674
AKU13538.1
Response regulator protein.
 
 
   0.663
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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