Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU13263.1Lytic transglycosylase. (263 aa)    
Predicted Functional Partners:
AKU10855.1
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.792
AKU13262.1
Putative serine protease.
  
 
 0.689
AKU10851.1
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
  
 
 0.655
AKU13265.1
Hypothetical protein.
 
 
 0.623
AKU14160.1
Putative transglycosylase.
 
  
 0.621
AKU14021.1
Hypothetical protein.
 
 0.593
AKU11282.1
ATPase, AAA family protein.
 
 0.581
AKU13458.1
Flagellar motor protein.
 
  
 0.549
hscA
Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
   
 0.540
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.540
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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