Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13266.1Response regulatory protein. (452 aa)    
Predicted Functional Partners:
AKU13267.1
Sensory transduction histidine kinase.
 
 
 
 0.940
AKU13265.1
Hypothetical protein.
 
 
 
 0.898
AKU14154.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.772
AKU13268.1
Glycosyltransferase.
 
   
 0.667
AKU13264.1
UDP-glucose/GDP-mannose dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.613
AKU13577.1
Exosortase 1.
  
     0.602
AKU13262.1
Putative serine protease.
 
   
 0.587
AKU13581.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
  
 
 0.585
AKU13582.1
Hypothetical protein.
  
     0.583
AKU13583.1
Polysaccharide deacetylase.
  
   
 0.581
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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