Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU13267.1Sensory transduction histidine kinase. (687 aa)    
Predicted Functional Partners:
AKU13265.1
Hypothetical protein.
 
   
 0.954
AKU13266.1
Response regulatory protein.
 
 
 
 0.940
AKU13268.1
Glycosyltransferase.
 
   
 0.863
AKU13262.1
Putative serine protease.
 
  
 0.843
AKU13588.1
Polysaccharide chain length determinant protein.
 
   
 0.797
AKU13577.1
Exosortase 1.
 
     0.794
AKU11477.1
Sensory transduction histidine kinase.
  
 
 0.786
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
  
 
 0.786
AKU10688.1
Hypothetical protein.
 
   
 0.784
AKU13583.1
Polysaccharide deacetylase.
 
   
 0.784
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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