Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU13327.12-hydroxy-3-oxopropionate reductase. (41 aa)    
Predicted Functional Partners:
AKU13328.1
Hydroxypyruvate reductase.
 
  
 0.623
AKU13329.1
Hypothetical protein.
 
    0.563
AKU10524.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
  
 0.529
AKU13326.1
Hypothetical protein.
       0.468
AKU10519.1
Hypothetical protein.
  
     0.467
AKU13331.1
DoxD family protein.
 
     0.454
AKU13330.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
  
 0.443
AKU11558.1
Exopolysaccharide biosynthesis protein.
 
     0.439
AKU13374.1
Hypothetical protein.
 
     0.418
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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