Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKU13356.1TRAP-T family transporter, large inner membrane subunit DctM. (446 aa)    
Predicted Functional Partners:
AKU13357.1
TRAP-T family transporter, periplasmic ligand binding protein, DctQ.
 
 0.997
AKU13358.1
TRAP-T family transporter, DctP subunit.
 
 0.993
AKU13647.1
C4-dicarboxylate-binding periplasmic protein.
 
 0.899
AKU14499.1
Dicarboxylate transport protein.
 
 
 0.857
AKU13646.1
C4-dicarboxylate transport system permease, small subunit.
 0.851
AKU14501.1
Hypothetical protein.
  
 0.823
AKU13355.1
Hypothetical protein.
       0.682
AKU13359.1
FAD dependent oxidoreductase family protein.
 
  
  0.575
AKU13364.1
Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family.
 
  
  0.451
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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