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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13360.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
AKU13359.1
FAD dependent oxidoreductase family protein.
 
     0.932
AKU13364.1
Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family.
 
     0.796
AKU13368.1
Cobaltochelatase CobT subunit.
 
     0.782
AKU13374.1
Hypothetical protein.
  
     0.758
AKU13367.1
Cobaltochelatase CobS subunit.
 
     0.627
AKU13376.1
Transciptional regulator, IclR family.
  
     0.583
AKU11558.1
Exopolysaccharide biosynthesis protein.
  
     0.576
AKU13358.1
TRAP-T family transporter, DctP subunit.
 
     0.575
AKU13363.1
Hypothetical protein.
 
     0.529
AKU13362.1
Thiamine biosynthesis protein.
 
     0.511
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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