Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13399.1Hypothetical protein. (399 aa)    
Predicted Functional Partners:
AKU10927.1
Hypothetical protein.
  
     0.581
AKU12634.1
Putative histidine kinase.
  
     0.556
AKU10116.1
Hypothetical protein.
  
     0.512
AKU13400.1
Cation/multidrug efflux pump protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.495
AKU13401.1
HlyD-like secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.491
AKU10123.1
Protein of unknown function (DUF4401) protein.
  
     0.476
AKU12601.1
Hypothetical protein.
  
     0.451
AKU10675.1
ABC-type sugar transport system periplasmic component-like.
  
     0.450
AKU13095.1
Hypothetical protein.
  
     0.445
AKU10827.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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