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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13400.1Cation/multidrug efflux pump protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1024 aa)    
Predicted Functional Partners:
AKU13401.1
HlyD-like secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.997
AKU12776.1
Acriflavin resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.967
AKU14325.1
Outer membrane efflux protein.
 
 0.944
AKU13739.1
Type I secretion outer membrane protein, TolC family.
  
 0.932
AKU12775.1
Multidrug efflux system protein.
  
  
 
0.914
AKU12774.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
 0.885
AKU13834.1
Hypothetical protein.
 0.880
AKU13883.1
Putative membrane-fusion protein, AcrA/AcrE family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.846
AKU14327.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.841
AKU13743.1
Putative RND efflux membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.794
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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