Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13426.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
AKU13429.1
Peptidase propeptide and ypeb domain-containing protein.
 
     0.675
AKU13427.1
Two-component sensor histidine kinase.
 
     0.670
AKU10786.1
Hypothetical protein.
  
     0.669
AKU12686.1
Positive regulator of sigma(E), RseC/MucC.
  
     0.629
AKU14021.1
Hypothetical protein.
 
     0.618
AKU13428.1
Two component response regulator.
       0.612
AKU11749.1
Granule-associated protein.
  
     0.556
AKU10298.1
Hypothetical protein.
  
     0.487
AKU13657.1
Hypothetical protein.
  
     0.467
AKU13633.1
Hypothetical protein.
  
     0.452
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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