Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13431.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
AKU13430.1
Hypothetical protein.
 
  
 0.944
AKU13432.1
Cytochrome b561 family protein.
   
 0.912
AKU13429.1
Peptidase propeptide and ypeb domain-containing protein.
 
     0.584
AKU13427.1
Two-component sensor histidine kinase.
       0.520
AKU13428.1
Two component response regulator.
       0.469
AKU10260.1
Cytochrome b561 family protein.
   
 0.464
AKU14594.1
Hypothetical protein.
  
     0.453
AKU13619.1
Putative cytochrome b561.
   
 0.447
AKU12073.1
Hypothetical protein.
  
     0.414
leuA-2
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
       0.414
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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