Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13445.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
AKU13446.1
6-pyruvoyltetrahydropterin synthase.
 
     0.678
AKU13192.1
Hypothetical protein.
  
     0.667
pcm
protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
   
    0.601
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
    
  0.558
AKU11922.1
Major facilitator superfamily MFS_1.
 
     0.546
AKU11129.1
Hypothetical protein.
  
     0.511
AKU14171.1
Putative inner membrane protein.
 
     0.437
AKU11312.1
Hypothetical protein.
   
    0.433
AKU13741.1
protein-L-isoaspartate o-methyltransferase.
   
    0.433
AKU13641.1
cAMP phosphodiesterase.
  
  
 0.423
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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