Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13450.1Hypothetical protein. (397 aa)    
Predicted Functional Partners:
AKU13447.1
Hypothetical protein.
 
     0.862
AKU13449.1
Fmu (Sun) domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
     0.838
AKU13448.1
Endonuclease.
 
   
 0.827
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
     
 0.822
AKU13965.1
Hypothetical protein.
  
 
 0.781
AKU10727.1
Hypothetical protein.
 
 0.775
AKU14215.1
Hypothetical protein.
 
     0.753
AKU10476.1
Hypothetical protein.
 
   
 0.744
AKU10847.1
Putative chaperon of flagellar synthesis.
  
     0.742
AKU12600.1
Hypothetical protein.
  
     0.737
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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