Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13459.1Flagellar motor protein. (246 aa)    
Predicted Functional Partners:
AKU13458.1
Flagellar motor protein.
 
 0.999
AKU13056.1
Flagellar motor protein.
  
 0.996
fliA
RNA polymerase factor sigma-28 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
 
  
 0.979
AKU10873.1
Flagellar motor switch protein.
 
  
 0.964
AKU10851.1
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.963
flgK
Flagellar hook-filament junction protein 1.
 
  
 0.963
fliQ
Flagellar biosynthesis protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
  
 0.963
fliP
Flagellar biosynthesis protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.963
AKU10866.1
Flagellar motor switch protein.
 
  
 0.957
AKU11986.1
Hypothetical protein.
 
 0.956
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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