Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
fliARNA polymerase factor sigma-28 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (259 aa)    
Predicted Functional Partners:
AKU10848.1
Putative negative regulator of flagellin synthesis.
  
 0.997
AKU13459.1
Flagellar motor protein.
 
  
 0.979
AKU10851.1
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.978
flgK
Flagellar hook-filament junction protein 1.
 
  
 0.972
AKU10866.1
Flagellar motor switch protein.
 
  
 0.971
AKU10867.1
Flagellar motor switch protein.
 
 
 0.970
AKU10853.1
Flagellar basal body protein.
 
  
 0.967
AKU10873.1
Flagellar motor switch protein.
 
  
 0.967
AKU10850.1
Flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.966
AKU10855.1
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.964
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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