Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKU13476.1Membrane-bound lytic transglycosylase. (336 aa)    
Predicted Functional Partners:
AKU13474.1
Hypothetical protein.
       0.823
AKU13475.1
Hypothetical protein.
       0.823
AKU13473.1
ATPase associated with various cellular activities AAA_3.
       0.714
AKU12053.1
Membrane-bound lytic murein transglycosylase D.
  
   
 0.535
rlpA
Lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
  
 0.506
AKU13472.1
Hypothetical protein.
       0.494
AKU10665.1
ClpXP protease specificity-enhancing factor.
  
     0.410
AKU13110.1
DNA polymerase III, delta subunit.
 
     0.403
lptD
Organic solvent tolerance transmembrane protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
   
 0.400
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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