Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKU10264.1 | AKU10630.1 | AzCIB_0359 | AzCIB_0725 | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | RNA-binding protein Hfq. | 0.456 |
| AKU10264.1 | ihfA-2 | AzCIB_0359 | AzCIB_3589 | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.646 |
| AKU10264.1 | ihfB | AzCIB_0359 | AzCIB_3615 | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.445 |
| AKU10264.1 | ihfB-2 | AzCIB_0359 | AzCIB_4542 | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Integration host factor beta-subunit (ihf-beta); This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.457 |
| AKU10630.1 | AKU10264.1 | AzCIB_0725 | AzCIB_0359 | RNA-binding protein Hfq. | DNA-binding protein HU-alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.456 |
| AKU10630.1 | acpP | AzCIB_0725 | AzCIB_2800 | RNA-binding protein Hfq. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.650 |
| AKU10630.1 | ihfA-2 | AzCIB_0725 | AzCIB_3589 | RNA-binding protein Hfq. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.769 |
| AKU10630.1 | ihfB | AzCIB_0725 | AzCIB_3615 | RNA-binding protein Hfq. | Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.419 |
| AKU10630.1 | ihfB-2 | AzCIB_0725 | AzCIB_4542 | RNA-binding protein Hfq. | Integration host factor beta-subunit (ihf-beta); This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.419 |
| AKU13481.1 | ihfA-2 | AzCIB_3588 | AzCIB_3589 | Transcriptional regulator, MerR family. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.946 |
| AKU13481.1 | pheS | AzCIB_3588 | AzCIB_3591 | Transcriptional regulator, MerR family. | phenylalanyl-tRNA synthetase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.814 |
| AKU13481.1 | pheT | AzCIB_3588 | AzCIB_3590 | Transcriptional regulator, MerR family. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.820 |
| AKU13481.1 | rplT | AzCIB_3588 | AzCIB_3592 | Transcriptional regulator, MerR family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.629 |
| AKU13481.1 | rpmI | AzCIB_3588 | AzCIB_3593 | Transcriptional regulator, MerR family. | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.646 |
| acpP | AKU10630.1 | AzCIB_2800 | AzCIB_0725 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | RNA-binding protein Hfq. | 0.650 |
| acpP | ihfA-2 | AzCIB_2800 | AzCIB_3589 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.743 |
| acpP | ihfB | AzCIB_2800 | AzCIB_3615 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.489 |
| acpP | ihfB-2 | AzCIB_2800 | AzCIB_4542 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Integration host factor beta-subunit (ihf-beta); This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.488 |
| acpP | rplT | AzCIB_2800 | AzCIB_3592 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.813 |
| acpP | rpmI | AzCIB_2800 | AzCIB_3593 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.670 |
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