STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13540.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
AKU13539.1
Guanyl-specific ribonuclease Sa.
 
 
 0.992
AKU13541.1
dATP pyrophosphohydrolase; Belongs to the Nudix hydrolase family.
       0.810
AKU13538.1
Response regulator protein.
       0.578
AKU11988.1
Hypothetical protein.
  
     0.510
AKU11987.1
Hypothetical protein.
  
     0.496
AKU11985.1
Hypothetical protein.
  
     0.457
AKU12788.1
Hypothetical protein.
   
    0.456
AKU12168.1
Phasin.
  
     0.454
AKU14233.1
Hypothetical protein.
  
     0.434
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.430
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.