Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13560.1Glycosyl transferase family protein. (317 aa)    
Predicted Functional Partners:
AKU13562.1
Hypothetical protein.
 
  
 0.940
AKU13563.1
Hypothetical protein.
 
   
 0.893
AKU13559.1
Glycogen synthase.
 
  
 0.885
AKU13561.1
Putative xylanase/chitin deacetylase.
  
 0.859
AKU13565.1
Sulfatase.
 
  
 0.853
AKU13558.1
Hypothetical protein.
       0.768
AKU13564.1
Glycosyltransferase family protein.
 
    
0.766
AKU13555.1
Hypothetical protein.
 
  
 0.756
AKU13567.1
Group 1 glycosyl transferase.
 
  
 0.722
AKU13568.1
Hypothetical protein.
 
     0.698
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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