Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13568.1Hypothetical protein. (423 aa)    
Predicted Functional Partners:
AKU13567.1
Group 1 glycosyl transferase.
 
     0.916
AKU13563.1
Hypothetical protein.
 
     0.784
AKU13553.1
Heparinase II/III.
 
     0.776
AKU13565.1
Sulfatase.
  
     0.768
AKU13574.1
Hypothetical protein.
 
     0.761
AKU13569.1
Glucosyl transferase GtrII.
       0.737
AKU10211.1
Hypothetical protein.
  
     0.711
AKU13560.1
Glycosyl transferase family protein.
 
     0.698
AKU13586.1
Hypothetical protein.
  
     0.695
AKU13669.1
Putative signal transduction protein.
  
     0.690
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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