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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13583.1Polysaccharide deacetylase. (278 aa)    
Predicted Functional Partners:
AKU13582.1
Hypothetical protein.
 
   
 0.945
AKU13581.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
  
 0.943
AKU13585.1
General secretion pathway protein-related protein.
 
     0.939
AKU13577.1
Exosortase 1.
 
     0.935
AKU13588.1
Polysaccharide chain length determinant protein.
 
   
 0.935
AKU13578.1
Glycosyltransferase family protein.
 
  
 0.932
AKU13580.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
  
 0.929
AKU13587.1
Exopolysaccharide biosynthesis protein.
 
   
 0.929
AKU13579.1
Amidotransferase class-II.
 
  
 0.914
AKU13589.1
Polysaccharide export protein.
 
   
 0.892
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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