Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13606.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
AKU13607.1
Symporter protein.
 
 
 0.976
AKU13605.1
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.965
AKU13610.1
Hypothetical protein.
 
  
 0.962
AKU13604.1
Hypothetical protein.
 
     0.952
AKU13608.1
Hypothetical protein.
 
   
 0.934
AKU13611.1
FAD dependent oxidoreductase.
 
   
 0.933
AKU13609.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.913
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
   
 0.711
AKU11527.1
Hypothetical protein.
 
 0.616
AKU13612.1
MerR family transcriptional regulator.
 
 
 
 0.606
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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