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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13612.1MerR family transcriptional regulator. (305 aa)    
Predicted Functional Partners:
AKU10973.1
D-lysine 5,6-aminomutase, alpha subunit.
   
 
 0.721
AKU13604.1
Hypothetical protein.
 
   
 0.674
AKU14212.1
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.646
AKU13607.1
Symporter protein.
 
  
 0.632
AKU13606.1
Hypothetical protein.
 
 
 
 0.630
AKU13608.1
Hypothetical protein.
 
     0.614
AKU11477.1
Sensory transduction histidine kinase.
   
 
 0.598
AKU12063.1
Two-component system sensor-response regulator hybrid protein.
   
 
 0.598
AKU13610.1
Hypothetical protein.
 
   
 0.594
AKU10031.1
PAS domain S-box.
   
 
 0.586
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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