STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13640.1Type II secretion system protein E. (786 aa)    
Predicted Functional Partners:
AKU10069.1
Type II secretion system protein F.
 
 
 0.917
AKU13245.1
Type II secretion system protein.
 
 
 0.917
AKU13532.1
Type IV fimbrial biogenesis protein.
 
 
 0.917
AKU13533.1
Type IV fimbrial biogenesis protein, pilC.
 
 
 0.917
AKU13534.1
Type IV fimbrial biogenesis protein, prepilin cysteine protease; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.862
AKU10070.1
Type II secretory pathway, pseudopilin PulG.
 
 
 0.718
AKU12240.1
Complex sensory protein.
  
 
 0.669
AKU13237.1
General secretion pathway protein G.
 
 
 0.667
AKU11896.1
DNA internalization-related competence protein.
  
  
 0.649
AKU11477.1
Sensory transduction histidine kinase.
  
 
 0.646
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.