Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU13642.1FHA domain-containing protein. (234 aa)    
Predicted Functional Partners:
AKU13643.1
Phosphoprotein phosphatase.
 
 0.890
AKU10692.1
Putative serine/threonine protein kinase.
 
 
 
 0.842
AKU12912.1
Serine/threonine-protein kinase.
 
 
 
 0.828
AKU13641.1
cAMP phosphodiesterase.
 
     0.811
AKU14128.1
Hypothetical protein.
 
    0.777
AKU14280.1
Putative serine/threonine protein kinase.
 
 
 
 0.776
AKU11759.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.760
AKU11041.1
Hypothetical protein.
   
 
 0.739
AKU14281.1
Putative phosphoprotein phosphatase.
 
 0.710
AKU12681.1
Hypothetical protein.
 
     0.691
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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