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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13646.1C4-dicarboxylate transport system permease, small subunit. (234 aa)    
Predicted Functional Partners:
AKU13645.1
C4-dicarboxylate transport system permease, large subunit.
 0.998
AKU13647.1
C4-dicarboxylate-binding periplasmic protein.
 
 
 0.995
AKU14500.1
C4-dicarboxylate uptake permease.
 0.827
AKU13356.1
TRAP-T family transporter, large inner membrane subunit DctM.
 0.802
AKU13358.1
TRAP-T family transporter, DctP subunit.
 
 
 0.711
AKU14499.1
Dicarboxylate transport protein.
 
 
 0.653
AKU13821.1
malonyl-CoA decarboxylase.
  
 0.550
AKU13648.1
Two-component system, LuxR family, sensor histidine kinase.
 
     0.527
AKU13644.1
Ornithine cyclodeaminase.
       0.508
AKU10812.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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