Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKU13649.1Two-component system, LuxR family, response regulator. (205 aa)    
Predicted Functional Partners:
AKU13648.1
Two-component system, LuxR family, sensor histidine kinase.
 
 0.995
tdiS
Sensor protein TdiS.
 
 
 0.785
AKU10891.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.757
AKU13650.1
RNA-binding S4 domain-containing protein.
       0.689
AKU10026.1
Sensor histidine kinase.
 
 
 0.669
AKU10255.1
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.655
AKU13647.1
C4-dicarboxylate-binding periplasmic protein.
    
 0.643
AKU10518.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.572
AKU13667.1
Hypothetical protein.
 
 
 0.541
AKU12184.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
  
 
 0.496
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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