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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU13655.1Cation transport ATPase. (896 aa)    
Predicted Functional Partners:
AKU13654.1
CBS domain-containing protein.
  
 
 0.676
boxA
Benzoyl-CoA oxygenase component A.
    
 0.607
AKU12128.1
Na+/H+ antiporter.
   
 0.595
AKU12536.1
Na+/H+ antiporter.
   
 0.595
AKU12991.1
Metallo-beta-lactamase superfamily protein.
 
 0.555
AKU10916.1
AMP-dependent synthetase and ligase.
  
 0.503
AKU10054.1
ABC transporter related protein.
   
 0.481
AKU10294.1
Lipooligosaccharide transport system ATP-binding protein.
  
 0.481
msbA
Mtultidrug ABC transporter; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
   
 0.481
AKU10556.1
ABC transporter, antibiotic transport system ATP-binding protein.
  
 0.481
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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