Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13664.1Hypothetical protein. (105 aa)    
Predicted Functional Partners:
AKU13665.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.628
AKU11749.1
Granule-associated protein.
  
     0.595
AKU11131.1
Hypothetical protein.
  
     0.588
AKU10298.1
Hypothetical protein.
  
     0.566
AKU10786.1
Hypothetical protein.
  
     0.559
AKU12490.1
Hypothetical protein.
  
     0.557
AKU12825.1
Hypothetical protein.
  
     0.549
AKU13444.1
Hypothetical protein.
  
     0.543
AKU11665.1
Hypothetical protein.
  
     0.512
AKU11667.1
Hypothetical protein.
  
     0.500
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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