Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13696.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
  
    0.889
AKU12179.1
Protein of unknown function DUF1328.
 
    0.661
AKU13470.1
Lipoprotein, NlpB/DapX family.
  
  
 0.622
AKU11764.1
Succinate dehydrogenase membrane anchor subunit.
  
     0.614
AKU14188.1
Hypothetical protein.
  
     0.589
AKU10664.1
Stringent starvation protein A; Belongs to the GST superfamily.
 
  
 0.581
AKU12307.1
Succinate dehydrogenase, cytochrome b556 subunit.
  
     0.563
AKU13694.1
Hypothetical protein; Belongs to the UPF0102 family.
       0.553
AKU10547.1
Hypothetical protein.
  
    0.549
bamD
Competence lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.534
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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