Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKU13706.1 | AKU13707.1 | AzCIB_3813 | AzCIB_3814 | Outer membrane lipoprotein. | Carbohydrate kinase. | 0.680 |
AKU13706.1 | AKU13708.1 | AzCIB_3813 | AzCIB_3815 | Outer membrane lipoprotein. | Hypothetical protein. | 0.515 |
AKU13706.1 | AKU13709.1 | AzCIB_3813 | AzCIB_3816 | Outer membrane lipoprotein. | Hypothetical protein. | 0.413 |
AKU13707.1 | AKU13706.1 | AzCIB_3814 | AzCIB_3813 | Carbohydrate kinase. | Outer membrane lipoprotein. | 0.680 |
AKU13707.1 | AKU13708.1 | AzCIB_3814 | AzCIB_3815 | Carbohydrate kinase. | Hypothetical protein. | 0.667 |
AKU13707.1 | AKU13709.1 | AzCIB_3814 | AzCIB_3816 | Carbohydrate kinase. | Hypothetical protein. | 0.482 |
AKU13708.1 | AKU13706.1 | AzCIB_3815 | AzCIB_3813 | Hypothetical protein. | Outer membrane lipoprotein. | 0.515 |
AKU13708.1 | AKU13707.1 | AzCIB_3815 | AzCIB_3814 | Hypothetical protein. | Carbohydrate kinase. | 0.667 |
AKU13708.1 | AKU13709.1 | AzCIB_3815 | AzCIB_3816 | Hypothetical protein. | Hypothetical protein. | 0.545 |
AKU13708.1 | rpoA | AzCIB_3815 | AzCIB_4013 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.452 |
AKU13708.1 | rpoB | AzCIB_3815 | AzCIB_4046 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.445 |
AKU13708.1 | rpoC | AzCIB_3815 | AzCIB_4045 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.506 |
AKU13708.1 | rpoZ | AzCIB_3815 | AzCIB_0221 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.454 |
AKU13709.1 | AKU13706.1 | AzCIB_3816 | AzCIB_3813 | Hypothetical protein. | Outer membrane lipoprotein. | 0.413 |
AKU13709.1 | AKU13707.1 | AzCIB_3816 | AzCIB_3814 | Hypothetical protein. | Carbohydrate kinase. | 0.482 |
AKU13709.1 | AKU13708.1 | AzCIB_3816 | AzCIB_3815 | Hypothetical protein. | Hypothetical protein. | 0.545 |
rpoA | AKU13708.1 | AzCIB_4013 | AzCIB_3815 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hypothetical protein. | 0.452 |
rpoA | rpoB | AzCIB_4013 | AzCIB_4046 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
rpoA | rpoC | AzCIB_4013 | AzCIB_4045 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
rpoA | rpoZ | AzCIB_4013 | AzCIB_0221 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.997 |
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