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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-2PilT protein domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (131 aa)    
Predicted Functional Partners:
AKU13712.1
Hypothetical protein.
 
 
 0.961
AKU10605.1
Virulence-associated protein VapB-like protein.
  
 
 0.823
AKU10063.1
Hypothetical protein.
   
 
 0.575
AKU10901.1
Hypothetical protein.
   
 
 0.575
apaH
Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
       0.574
AKU11291.1
Hypothetical protein.
   
   0.540
AKU13338.1
Helix-turn-helix protein, CopG protein.
   
   0.540
AKU11405.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.486
AKU13862.1
Addiction module antitoxin.
 
   
 0.462
AKU14570.1
Plasmid maintenance system antidote protein VapI.
 
   
 0.402
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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