Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU13723.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
AKU13724.1
Hypothetical protein.
 
    0.935
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
  
 0.898
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.890
AKU10775.1
Hypothetical protein.
  
    0.741
AKU13726.1
Glycosyltransferase involved in cell wall biogenesis.
 
    0.630
AKU13722.1
Hypothetical protein.
       0.570
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
  
 0.538
AKU13725.1
Glucose-1-phosphate cytidylyltransferase.
     
 0.528
AKU10428.1
uroporphyrinogen-III methylase, c-terminal half; Belongs to the precorrin methyltransferase family.
     
 0.505
AKU13500.1
uroporphyrinogen-III methylase siroheme synthase; Belongs to the precorrin methyltransferase family.
     
 0.505
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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