Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13732.1ABC subunit of A-band LPS efflux transporter. (325 aa)    
Predicted Functional Partners:
AKU13733.1
ABC transporter.
 
  
 0.985
AKU13554.1
Hypothetical protein.
 
  
 0.976
AKU13555.1
Hypothetical protein.
  
 
 
0.923
AKU10057.1
Type I secretion system ATPase.
 
  
 0.658
AKU12932.1
Hypothetical protein.
    
 0.637
AKU12088.1
Putative ABC-2 type transport system permease protein.
  
 
 0.636
AKU13718.1
Glycosyltransferase.
 
 
 
 0.632
AKU11725.1
Oligopeptide-binding protein oppA precursor.
  
 
 0.626
AKU12054.1
ATPase component dipeptide/oligopeptide/nickel ABC transporter; Belongs to the ABC transporter superfamily.
    
 0.625
AKU10230.1
Periplasmic binding protein/LacI transcriptional regulator.
   
 
 0.624
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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